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Artistic rendering of wisp model

Wispack – An R package for warped sigmoidal Poisson-process mixed-effects modeling

Wispack (pronounced “wisp package” or “wisp pack”) is an R package for testing for between-group effects on spatial variation in spatial transcriptomics data. As such variation is often functional, these can be thought of as functional spatial effects (FSE).

Michael Barkasi • 8 days ago

MERFISHsoftwarespatial transcriptomics
Example of Estimated Precision (PPV) by gene barcode for a MERFISH run

Quality Control Algorithm for MERFISH Software

Quality control algorithm and software that can be used to improve MERFISH runs.

Michael Barkasi • 23 days ago

MERFISHQCsoftwarespatial transcriptomics